GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Alexandre Cormier

Laura Leroi

Stéphanie Robin

Torsten Seemann

Jonathan Kreplak

Natalie Kucher

Frederick Tan

Elizabeth Humphries

Robert Meller

Yo Yehudi

Katherine Cox

Deepti Varshney

Saskia Hiltemann

Anna Syme

Daniela Butano

Mateo Boudet

Bazante Sanders

Miaomiao Zhou

Björn Grüning

Paul Zierep

Jasper Ouwerkerk

Erwan Corre

Bérénice Batut

Anton Nekrutenko

Cristóbal Gallardo

Anthony Bretaudeau

Candace Savonen

Simon Gladman

Nathan Dunn

Simon Bray

Ava Hoffman

Delphine Lariviere

Tristan Reynolds

Helena Rasche

Teresa Müller

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

Avans

Melbourne Bioinformatics

Australian BioCommons

NHGRI GDS Community Network

IFB

ABRomics

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

NHGRI ANVIL

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

The University of Melbourne